Job ID: XYZ0123 | You submitted 148 sequence/s | We found 62 IRE/s in 45 different sequence/s
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⚠ THIS IS A PREDICTION. Experimental validation using EMSA is needed.
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| Sequence | Start | End | Loop Type | Mismatches | 3' Bulge | N25 | GU/UG | Pred. Loop | Pred. Pairs | Pred. C8 | Free Energy | Quality | Location | Distance to cap | Distance to start codon | Distance to end codon | Select |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NM_000961.4 | 445 | 476 | 20.0 | N10-N23:C_T | - | G | 2.0 | -2.4 | Low | CDS | - | - | - | ||||
| NM_000961.4 | 445 | 477 | 20.0 | - | N22b:T | G | 2.0 | 0.0 | Low | CDS | - | - | - | ||||
| NM_000961.4 | 5250 | 5281 | 8.0 | N13-N20:C_C | - | G | 0.0 | -7.9 | Low | 3'UTR | - | - | 3741 | ||||
| NM_001005514.2 | 3193 | 3224 | 8.0 | N11-N22:T_T | - | A | 1.0 | -1.7 | Low | 3'UTR | - | - | 2182 | ||||
| NM_001007026.2 | 3020 | 3051 | 16.0 | N10-N23:G_A | - | C | 0.0 | -9.8 | Medium | CDS | - | - | - | ||||
| NM_001007026.2 | 3703 | 3734 | 1.0 | N09-N24:A_A | - | T | 0.0 | -7.7 | Medium | CDS | - | - | - | ||||
| NM_001018091.6 | 1499 | 1530 | 16.0 | N09-N24:A_A | - | G | 0.0 | -3.2 | Low | 3'UTR | - | - | 46 | ||||
| NM_001040102.3 | 939 | 970 | 14.0 | N07-N25:C_T | - | T | 0.0 | -7.4 | Low | 3'UTR | - | - | 492 | ||||
| NM_001136004.3 | 4714 | 4745 | 20.0 | N13-N20:A_A | - | A | 0.0 | -0.4 | Medium | 3'UTR | - | - | 1433 | ||||
| NM_001136562.3 | 4363 | 4394 | 9a | N12-N21:C_C | - | A | 1.0 | 0.0 | Low | 3'UTR | - | - | 1592 | ||||
| NM_001161566.3 | 3756 | 3787 | 8.0 | N07-N25:T_C | - | C | 0.0 | 0.0 | Low | CDS | - | - | - | ||||
| NM_001164530.1 | 14 | 46 | 1.0 | - | N21b:G | C | 1.0 | -5.3 | Medium | CDS | - | - | - | ||||
| NM_001164530.1 | 2051 | 2082 | 16.0 | N07-N25:A_C | - | C | 0.0 | 0.0 | Very Low | 3'UTR | - | - | 891 | ||||
| NM_001178141.2 | 3588 | 3619 | 20.0 | N12-N21:T_T | - | G | 1.0 | -10.6 | Low | 3'UTR | - | - | 2418 | ||||
| NM_001178141.2 | 6572 | 6604 | 20.0 | - | N22b:A | A | 2.0 | 0.0 | Low | 3'UTR | - | - | 5403 | ||||
| NM_001178141.2 | 7523 | 7554 | 2.0 | N07-N25:T_C | - | C | 2.0 | -2.6 | Very Low | 3'UTR | - | - | 6354 | ||||
| NM_001178141.2 | 7944 | 7976 | 5.0 | - | N20b:T | T | 1.0 | -1.4 | Medium | 3'UTR | - | - | 6775 | ||||
| NM_001178141.2 | 9023 | 9054 | 10.0 | N12-N21:C_C | - | C | 1.0 | -5.5 | Low | 3'UTR | - | - | 7854 | ||||
| NM_001199097.2 | 1126 | 1158 | 8.0 | - | N22b:T | C | 1.0 | -1.2 | Medium | CDS | - | - | - | ||||
| NM_001252065.2 | 5253 | 5284 | 16.0 | N09-N24:T_T | - | C | 2.0 | -0.8 | Low | 3'UTR | - | - | 3576 | ||||
| NM_001286050.2 | 2569 | 2600 | 5.0 | N11-N22:A_A | - | G | 1.0 | -2.7 | Low | 3'UTR | - | - | 1642 | ||||
| NM_001286050.2 | 6312 | 6344 | 8.0 | - | N21b:G | G | 0.0 | -0.5 | Low | 3'UTR | - | - | 5385 | ||||
| NM_001316346.2 | 36 | 68 | 5.0 | - | N20b:T | C | 1.0 | -7.5 | Medium | 5'UTR | 51 | 36 | - | ||||
| NM_001330192.2 | 1815 | 1846 | 19.0 | N10-N23:A_A | - | A | 2.0 | 0.0 | Low | CDS | - | - | - | ||||
| NM_001348186.2 | 4422 | 4453 | 20.0 | N12-N21:T_T | - | T | 2.0 | -0.9 | Low | 3'UTR | - | - | 712 | ||||
| NM_001348186.2 | 6506 | 6537 | 13.0 | N10-N23:T_T | - | A | 0.0 | 0.0 | Low | 3'UTR | - | - | 2796 | ||||
| NM_001348186.2 | 6506 | 6538 | 13.0 | - | N22b:T | A | 0.0 | 0.0 | Medium-Low | 3'UTR | - | - | 2797 | ||||
| NM_001352800.2 | 1425 | 1456 | 11.0 | N07-N25:G_A | - | A | 1.0 | -6.1 | Low | CDS | - | - | - | ||||
| NM_001352800.2 | 2401 | 2432 | 20.0 | N13-N20:C_C | - | T | 1.0 | -2.9 | Medium-Low | 3'UTR | - | - | 357 | ||||
| NM_001354404.2 | 1509 | 1540 | 1.0 | N12-N21:C_A | - | A | 0.0 | -5.2 | High | CDS | - | - | - | ||||
| NM_001354497.2 | 1395 | 1426 | 16.0 | N09-N24:A_A | - | T | 2.0 | -5.8 | Medium | CDS | - | - | - | ||||
| NM_001354497.2 | 1395 | 1427 | 16.0 | - | N23b:A | C | 1.0 | -8.3 | High | CDS | - | - | - | ||||
| NM_001354690.3 | 431 | 462 | 21.0 | N12-N21:A_C | - | G | 1.0 | -2.4 | Low | CDS | - | - | - | ||||
| NM_001355573.2 | 3027 | 3059 | 20.0 | - | N21b:T | G | 0.0 | -4.9 | High-Medium | 3'UTR | - | - | 2010 | ||||
| NM_001363742.2 | 224 | 255 | 2.0 | N10-N23:G_G | - | G | 0.0 | -8.1 | Medium | CDS | - | - | - | ||||
| NM_001371119.1 | 1436 | 1467 | 15.0 | N13-N20:G_A | - | A | 0.0 | -6.6 | Low | CDS | - | - | - | ||||
| NM_001375859.1 | 3240 | 3271 | 1.0 | N11-N22:A_G | - | A | 1.0 | -0.7 | Medium-Low | 3'UTR | - | - | 1086 | ||||
| NM_001377370.1 | 2248 | 2279 | 19.0 | N13-N20:T_C | - | A | 0.0 | -3.6 | Medium | 3'UTR | - | - | 1395 | ||||
| NM_001388312.1 | 2141 | 2172 | 21.0 | N07-N25:G_G | - | G | 2.0 | -6.5 | Very Low | 3'UTR | - | - | 940 | ||||
| NM_001398282.1 | 913 | 944 | 21.0 | N12-N21:G_G | - | A | 0.0 | 0.0 | Low | CDS | - | - | - | ||||
| NM_001406256.1 | 1788 | 1819 | 17.0 | N11-N22:C_A | - | T | 2.0 | -6.8 | Low | CDS | - | - | - | ||||
| NM_001406256.1 | 2228 | 2259 | 3.0 | - | - | G | 1.0 | -7.8 | Medium | CDS | - | - | - | ||||
| NM_001406256.1 | 2278 | 2309 | 14.0 | N13-N20:G_G | - | C | 1.0 | -3.2 | Medium-Low | CDS | - | - | - | ||||
| NM_001406373.1 | 1345 | 1376 | 11.0 | N10-N23:C_T | - | A | 0.0 | -3.6 | Low | CDS | - | - | - | ||||
| NM_001406488.1 | 1052 | 1083 | 21.0 | N09-N24:T_C | - | G | 0.0 | -3.2 | Low | CDS | - | - | - | ||||
| NM_001406901.1 | 4173 | 4204 | 8.0 | N10-N23:A_C | - | A | 0.0 | -0.8 | Low | 3'UTR | - | - | 1829 | ||||
| NM_002010.3 | 51 | 83 | 14.0 | - | N22b:C | C | 1.0 | -4.0 | Medium | 5'UTR | 66 | 775 | - | ||||
| NM_002815.4 | 1975 | 2006 | 16.0 | N13-N20:A_A | - | G | 0.0 | -3.9 | Low | 3'UTR | - | - | 708 | ||||
| NM_004011.4 | 6742 | 6773 | 13.0 | N07-N25:A_A | - | A | 1.0 | -4.7 | Low | CDS | - | - | - | ||||
| NM_005100.4 | 3123 | 3154 | 2.0 | N13-N20:C_A | - | G | 0.0 | -3.3 | Medium | CDS | - | - | - | ||||
| NM_005535.3 | 2041 | 2072 | 21.0 | N07-N25:C_T | - | T | 1.0 | -7.0 | Low | CDS | - | - | - | ||||
| NM_016101.5 | 430 | 461 | 8.0 | N10-N23:G_G | - | G | 2.0 | -0.9 | Low | CDS | - | - | - | ||||
| NM_016157.4 | 150 | 181 | 16.0 | N12-N21:C_T | - | G | 1.0 | -7.0 | Low | CDS | - | - | - | ||||
| NM_020686.6 | 4088 | 4120 | 19.0 | - | N21b:T | G | 1.0 | -1.7 | Low | 3'UTR | - | - | 2465 | ||||
| NM_020748.4 | 2420 | 2452 | 14.0 | - | N20b:C | G | 1.0 | 0.0 | Low | CDS | - | - | - | ||||
| NM_025137.4 | 6458 | 6489 | 18.0 | N11-N22:C_A | - | A | 1.0 | -7.7 | Medium-Low | CDS | - | - | - | ||||
| NM_145174.2 | 2249 | 2280 | 16.0 | N11-N22:G_A | - | A | 0.0 | 0.0 | Low | 3'UTR | - | - | 1216 | ||||
| NM_170686.3 | 1652 | 1683 | 20.0 | N09-N24:G_G | - | G | 0.0 | -5.4 | Low | CDS | - | - | - | ||||
| NM_170686.3 | 2527 | 2558 | 21.0 | N12-N21:C_C | - | A | 1.0 | -1.6 | Medium-Low | 3'UTR | - | - | 324 | ||||
| NM_181460.4 | 2272 | 2303 | 7.0 | N07-N25:G_G | - | G | 1.0 | -2.7 | Low | 3'UTR | - | - | 680 | ||||
| NM_181460.4 | 2272 | 2304 | 7.0 | - | N22b:A | C | 2.0 | -1.2 | Medium-Low | 3'UTR | - | - | 681 | ||||
| NM_182472.5 | 5413 | 5444 | 2.0 | N09-N24:A_A | - | A | 0.0 | 0.0 | Medium | 3'UTR | - | - | 1634 |
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